USDA ARS VCRU Data Server
This web site, http://www.vcru.wisc.edu/sdata, contains data from the laboratory of Philipp W. Simon, USDA-ARS Vegetable Crops Research Unit [Click here for our web page]
 

B493×QAL Linkage Map v.2

Carotenoid biosynthesis structural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping
B. J. Just; C. A. F. Santos; M. E. N. Fonseca; L. S. Boiteux; B. B. Oloizia; P. W. Simon
Theor Appl Genet (2007) 114:693–704

This population was earlier referenced by Carlos Santos (v.1),
and later referenced by Dariusz Grzebelus (v.3), and Pablo Cavagnaro (v.4)

marker information page


Details about the map

Details about individual markers are available by clicking on any of the markers on the map, or by going directly to the marker information page

Linkage groups of the carrot genetic map

1      2      3      4      5      6      7      8      9

Marker
info
 Left=QAL    Right=B493Marker
info
aagctc239-q/b
acccta508-q
accctg082-q
CCD2
gggcat314-q
gagctt481-q
gatctc155-q
ggagcac100-q
dcdrtsg
gatctc103-q
aaccat219-4
accctg181-4
ggacag233-4
ggacag073-4
gagcac444-4/h
ggtctt482-4
acactt195-4
aaccat228-4
gggcaa120-4
gatctc181-4/h
aggcta108-4/h
ggtctt680-4
gggcaa477-4/h
agcctt222-4
CCD2
ggacaa552-4
ggacag105-4
dcdrtsg
accctg222-4
aaccat218-4/b
gggctg169-4
ggacaa623-4
aggcta289-4
acccta314-q
NCED1
ggtcag098-q
ggacaa272-q
ggacag305-q
ggtcag205-q
aggcat339-q
aggctg078-q
aggctg080-q
gggctg146-q
CHXE
ggtcag182-q
NCED2
ggacag159-q
GGPS2
gatcat389-q
PDS
acccta111-q
aaccta353-4
NCED1
gggcat282-4/h
gggcaa256-4
ggacaa222-4/b
acactt306-4
ggacaa346-4
CHXE
NCED2
aagcag075-4/h
GGPS2
PDS
aggcat299-q
PSY1
acccta260-q
CCS
  (here LCYB2)
agccaa136-q/h
CCD1
CCD3
agccaa304-q
acccta105-q
aggcat116-q
gggcat602-q
ggtctt549-175
gggcat136-q
CHXB1
LCYB
  (here LCYB2)
aggcat327-q
aagctc186-q/h
PSY1
CCS
  (here LCYB2)
CCD1
CCD3
aaccta384-4
agcctt401-4
gggctg107-4
ggtctt549-175
CHXB1
LCYB
  (here LCYB2)
ggacag259-4/b
gggcat096-4
aggcat469-4
aagcag484-4
gatcat488-q
gggcaa097-q
gggcat119-q/h
ZDS1
acccac112-q
ggtcag287-164
gagctt300-q
acacaa085-q
agcctt314-q
acccta108-q
acactt100-q
gggctg294-4
ggacaa360-4
ZDS1
aagcag428-4
aggcta380-4
acccac137-4
acactt099-4
aagcag097-4/b
ggtcag287-164
aaccat100-4/h
aggcta085-4
aggcta084-4
acacaa106-q/b
aggcta262-q
gggcaa612-q
ggtcag113-q
ggtcag422-q
agcctt215-q
agcctt349-q
gagctt364-q
aaccat089-q
ZDS2
ggacag480-q
ZEP
aagcag233-q
Y2Mark
aaccat178-q
aaccat202-4/b
ggtctt416-4
aggctg066-4
aggcat251-4
acacaa079-4
acactt153-4/h
gggcaa139-4
ZDS2
ZEP
gatctc177-4
aagcag094-4
gggcaa229-4/h
acactt135-4
Y2Mark
aaccat266-4
acactt400-q
agccaa253-q
CRTISO
VDE
ggtcag072-381
NCED3
gggcaa147-q
scar-opk9c-co
gatcat258-q
scar-aflp3
CHXB2
ggacag250-q
gggcaa289-q/h
gggcat165-q/h
acacaa174-q
agcctt206-q/h
acactt255-q
gatctc251-q
acacaa290-q
aaccat367-4
agccaa167-4
CRTISO
VDE
ggtctt098-4
ggtcag072-381
NCED3
scar-opk9c-co
scar-aflp3
CHXB2
ggtctt471-4
gatctc386-4/b
gggcat231-4
ggacag148-4
acacaa319-4/h
agcctt089-4
aagcag079-4
aagcag648-4
aggctg173-q
gatcat196-q
gagcac072-q
gggcaa469-q
ssr-w93
ggacag222-q
ggtctt143-q
aaccat450-q
gggctg253-354
aagcag134-q/b
gagctt249-q
gagctt122-q
accctg110-4
acccac190-4
ggtctt364-4
gatctc097-4
aggcta341-4
aggcta203-4
ssr-w93
gggctg253-354
gatctc239-4
gatctc459-4
aagcag176-4
acacaa356-4
gatctc083-4
acactt298-q
gagctt338-q
aagctc085-q
gagctt431-q
ggtcag366-q
acactt339-q
acactt079-q
ggtcag127-q
aggcat104-q
gggcat322-q
aaccat378-q
PSY2
ggacaa462-q
gggcaa114-q
acacaa165-q
aagcag251-q
aagctc069-4
aggcta345-4
agccaa233-4
PSY2
aagcag073-4
ggacag464-4
aagctc523-4
aaccac177-q
ggacag428-q
aagctc263-q
agcctt107-q
aggcta073-q
LCYE
gggctg129-q
ggtctt345-q
gggctg089-q
aaccat260-q
gggcaa416-q
acactt209-4
acccta283-4
ggtctt256-4
gatcat068-4
gatctc067-4
ggacag144-4
aagcag394-4
aggctg110-4
LCYE
acacaa368-4
aaccat106-4
aaccta112-4
aaccat435-4